Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF407Q9C0G0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 AC005332.1-201ENST00000577698 1310 ntBASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 AC007952.6-201ENST00000573168 2673 ntBASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 AC003957.1-201ENST00000625108 2673 ntBASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF407Q9C0G0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AC092647.4-201ENST00000457211 535 ntBASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 TREX1-205ENST00000625293 1783 ntBASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 AP000550.4-202ENST00000639755 178 ntBASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF407Q9C0G0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF407Q9C0G0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 STARP1-201ENST00000397973 869 ntBASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 HYMAI.1-201ENST00000620949 238 ntBASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF407Q9C0G0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms