Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AL031133.1-201ENST00000406807 723 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC009947.2-201ENST00000444014 672 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC128688.1-201ENST00000487626 519 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC063952.2-201ENST00000498792 1227 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC116562.4-201ENST00000641316 2276 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
KRTAP4-3Q9BYR4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 TSPY5P-201ENST00000426936 936 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SLC25A1P2-201ENST00000430693 912 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 BX664615.1-201ENST00000443558 458 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 CCR12P-201ENST00000446203 998 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 COX11P1-201ENST00000489116 835 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 GCSHP2-201ENST00000560971 527 ntBASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC6.46□□□□□ -1.38
KRTAP4-3Q9BYR4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms