Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AC105265.2-201ENST00000467189 838 ntBASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AC009299.2-201ENST00000482477 511 ntBASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AL512631.2-201ENST00000604634 923 ntBASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC093525.10-201ENST00000625130 1569 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC097381.1-201ENST00000429019 1296 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 CDV3P1-201ENST00000471403 739 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AC138907.5-202ENST00000569484 235 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 AL356652.1-201ENST00000615962 565 ntBASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LCE3DQ9BYE3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms