Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EBF4Q9BQW3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.57■□□□□ 0.56
EBF4Q9BQW3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.56■□□□□ 0.56
EBF4Q9BQW3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 AC005181.1-201ENST00000604782 1256 ntBASIC18.56■□□□□ 0.56
EBF4Q9BQW3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EBF4Q9BQW3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 AC073210.2-201ENST00000430369 194 ntBASIC18.55■□□□□ 0.56
EBF4Q9BQW3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 AC005829.2-201ENST00000571422 1056 ntBASIC18.55■□□□□ 0.56
EBF4Q9BQW3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 AC087623.3-201ENST00000607047 1098 ntBASIC18.55■□□□□ 0.56
EBF4Q9BQW3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 AC073592.3-201ENST00000625118 1834 ntBASIC18.55■□□□□ 0.56
EBF4Q9BQW3 AC020916.1-201ENST00000587762 1774 ntBASIC18.55■□□□□ 0.56
EBF4Q9BQW3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EBF4Q9BQW3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 AL390719.1-204ENST00000412397 1219 ntBASIC18.54■□□□□ 0.56
EBF4Q9BQW3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.54■□□□□ 0.56
EBF4Q9BQW3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
EBF4Q9BQW3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms