Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 PCDHA12-202ENST00000613593 2588 ntBASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB3IPQ96QF0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 AC233992.3-201ENST00000607491 485 ntBASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 KRT87P-202ENST00000534226 1464 ntBASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB3IPQ96QF0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 AC012317.2-201ENST00000623305 2251 ntBASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB3IPQ96QF0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 ZNF815P-204ENST00000434898 1737 ntBASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAB3IPQ96QF0 CDV3P1-201ENST00000471403 739 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms