Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 AC098590.1-201ENST00000468126 897 ntBASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 AC142381.4-202ENST00000563973 229 ntBASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 CR392000.1-201ENST00000624770 1228 ntBASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 AL031985.4-201ENST00000642138 673 ntBASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 RCC2P6-201ENST00000526625 1557 ntBASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MS4A4EQ96PG1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
MS4A4EQ96PG1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 PRSS44-201ENST00000515154 1146 ntBASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 CROCCP3-202ENST00000420820 1947 ntBASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MS4A4EQ96PG1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 GCSHP5-201ENST00000443090 522 ntBASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MS4A4EQ96PG1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 KRT8P11-201ENST00000409686 1436 ntBASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 AL020996.1-203ENST00000536896 2307 ntBASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 AC004951.3-201ENST00000418645 1148 ntBASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 AL158047.1-201ENST00000445918 881 ntBASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
MS4A4EQ96PG1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MS4A4EQ96PG1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms