Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 AL121912.1-201ENST00000603683 238 ntBASIC16.13■□□□□ 0.17
SPG11Q96JI7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 MIR574-201ENST00000385209 96 ntBASIC16.12■□□□□ 0.17
SPG11Q96JI7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SPG11Q96JI7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPG11Q96JI7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.11■□□□□ 0.17
SPG11Q96JI7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 AL157888.1-201ENST00000631930 593 ntBASIC16.11■□□□□ 0.17
SPG11Q96JI7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.11■□□□□ 0.17
SPG11Q96JI7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPG11Q96JI7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.11■□□□□ 0.17
SPG11Q96JI7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 KRT8P26-201ENST00000534154 1276 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 AC024243.1-201ENST00000609234 778 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 AL590627.1-203ENST00000421194 1026 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 KRT18P67-201ENST00000432816 1264 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 AL773604.1-201ENST00000617417 272 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPG11Q96JI7 AC092720.2-201ENST00000602388 1665 ntBASIC16.1■□□□□ 0.17
SPG11Q96JI7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.1■□□□□ 0.17
SPG11Q96JI7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPG11Q96JI7 LINC01711-201ENST00000598340 967 ntBASIC16.09■□□□□ 0.17
SPG11Q96JI7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.09■□□□□ 0.17
SPG11Q96JI7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.09■□□□□ 0.17
SPG11Q96JI7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms