Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 FP475955.4-201ENST00000623131 1990 ntBASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 AC092865.7-201ENST00000641832 219 ntBASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCD1Q96GM5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 ATP5G1P1-201ENST00000448724 379 ntBASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 AC010203.1-204ENST00000548782 407 ntBASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 RN7SL850P-201ENST00000579959 291 ntBASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.02■□□□□ 0.8
SMARCD1Q96GM5 KRT8P3-201ENST00000519669 1449 ntBASIC20.02■□□□□ 0.79
SMARCD1Q96GM5 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.79
SMARCD1Q96GM5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 KRT18P57-201ENST00000443599 1254 ntBASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 AC005332.7-201ENST00000614046 2005 ntBASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCD1Q96GM5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 TMPOP1-202ENST00000424642 1267 ntBASIC20■□□□□ 0.79
SMARCD1Q96GM5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 AL512604.3-201ENST00000569583 964 ntBASIC20■□□□□ 0.79
SMARCD1Q96GM5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
SMARCD1Q96GM5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 AC116562.4-201ENST00000641316 2276 ntBASIC20■□□□□ 0.79
SMARCD1Q96GM5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCD1Q96GM5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SMARCD1Q96GM5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 AC008622.2-201ENST00000617006 1229 ntBASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms