Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 AL353708.3-201ENST00000610272 989 ntBASIC20.13■□□□□ 0.81
TRIM11Q96F44 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM11Q96F44 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM11Q96F44 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 AL353807.1-201ENST00000427475 662 ntBASIC20.12■□□□□ 0.81
TRIM11Q96F44 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 AC128676.1-201ENST00000454392 318 ntBASIC20.12■□□□□ 0.81
TRIM11Q96F44 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 AP002982.1-201ENST00000492365 877 ntBASIC20.12■□□□□ 0.81
TRIM11Q96F44 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 AL512353.2-201ENST00000448759 1962 ntBASIC20.12■□□□□ 0.81
TRIM11Q96F44 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
TRIM11Q96F44 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM11Q96F44 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM11Q96F44 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM11Q96F44 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM11Q96F44 POU5F1P3-201ENST00000428824 1078 ntBASIC20.1■□□□□ 0.81
TRIM11Q96F44 KSR1P1-201ENST00000446298 240 ntBASIC20.1■□□□□ 0.81
TRIM11Q96F44 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM11Q96F44 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms