Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 AL121906.2-201ENST00000621597 723 ntBASIC18.11■□□□□ 0.49
LRRC58Q96CX6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 AC004911.1-201ENST00000416316 871 ntBASIC18.1■□□□□ 0.49
LRRC58Q96CX6 KRT18P16-201ENST00000510337 1294 ntBASIC18.1■□□□□ 0.49
LRRC58Q96CX6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
LRRC58Q96CX6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.09■□□□□ 0.49
LRRC58Q96CX6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 AC105036.2-201ENST00000569468 176 ntBASIC18.09■□□□□ 0.49
LRRC58Q96CX6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 AC073592.3-201ENST00000625118 1834 ntBASIC18.09■□□□□ 0.49
LRRC58Q96CX6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC58Q96CX6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC58Q96CX6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRRC58Q96CX6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms