Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLDN23Q96B33 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN23Q96B33 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN23Q96B33 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN23Q96B33 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN23Q96B33 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLDN23Q96B33 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN23Q96B33 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN23Q96B33 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN23Q96B33 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN23Q96B33 Z83836.1-201ENST00000624605 1642 ntBASIC19.02■□□□□ 0.64
CLDN23Q96B33 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN23Q96B33 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN23Q96B33 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN23Q96B33 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CLDN23Q96B33 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN23Q96B33 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN23Q96B33 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN23Q96B33 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19■□□□□ 0.63
CLDN23Q96B33 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19■□□□□ 0.63
CLDN23Q96B33 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19■□□□□ 0.63
CLDN23Q96B33 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19■□□□□ 0.63
CLDN23Q96B33 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19■□□□□ 0.63
CLDN23Q96B33 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19■□□□□ 0.63
CLDN23Q96B33 AC074051.2-201ENST00000565115 352 ntBASIC19■□□□□ 0.63
CLDN23Q96B33 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19■□□□□ 0.63
CLDN23Q96B33 AC005332.3-201ENST00000589904 676 ntBASIC19■□□□□ 0.63
CLDN23Q96B33 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19■□□□□ 0.63
CLDN23Q96B33 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN23Q96B33 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19■□□□□ 0.63
CLDN23Q96B33 AC233702.3-201ENST00000578656 1387 ntBASIC19■□□□□ 0.63
CLDN23Q96B33 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19■□□□□ 0.63
CLDN23Q96B33 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN23Q96B33 KRT8P7-201ENST00000533003 1432 ntBASIC19■□□□□ 0.63
CLDN23Q96B33 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19■□□□□ 0.63
CLDN23Q96B33 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.99■□□□□ 0.63
CLDN23Q96B33 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN23Q96B33 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 AC138894.3-201ENST00000603787 634 ntBASIC18.99■□□□□ 0.63
CLDN23Q96B33 AL390719.2-201ENST00000606993 987 ntBASIC18.99■□□□□ 0.63
CLDN23Q96B33 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLDN23Q96B33 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms