Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS33AQ96AX1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 AL133373.2-201ENST00000623187 2828 ntBASIC18.28■□□□□ 0.52
VPS33AQ96AX1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 AC026185.1-201ENST00000445748 174 ntBASIC18.28■□□□□ 0.52
VPS33AQ96AX1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VPS33AQ96AX1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 FEM1AP3-201ENST00000403722 1741 ntBASIC18.27■□□□□ 0.52
VPS33AQ96AX1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 AL121906.2-201ENST00000621597 723 ntBASIC18.27■□□□□ 0.52
VPS33AQ96AX1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.27■□□□□ 0.52
VPS33AQ96AX1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VPS33AQ96AX1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.26■□□□□ 0.51
VPS33AQ96AX1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms