Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.46■□□□□ 0.55
NCLNQ969V3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NCLNQ969V3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.46■□□□□ 0.55
NCLNQ969V3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NCLNQ969V3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.46■□□□□ 0.55
NCLNQ969V3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.46■□□□□ 0.55
NCLNQ969V3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.46■□□□□ 0.55
NCLNQ969V3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NCLNQ969V3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NCLNQ969V3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.46■□□□□ 0.54
NCLNQ969V3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.45■□□□□ 0.54
NCLNQ969V3 KRASP1-201ENST00000407852 552 ntBASIC18.45■□□□□ 0.54
NCLNQ969V3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.45■□□□□ 0.54
NCLNQ969V3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.45■□□□□ 0.54
NCLNQ969V3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.45■□□□□ 0.54
NCLNQ969V3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.45■□□□□ 0.54
NCLNQ969V3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.45■□□□□ 0.54
NCLNQ969V3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCLNQ969V3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.45■□□□□ 0.54
NCLNQ969V3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NCLNQ969V3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.44■□□□□ 0.54
NCLNQ969V3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.44■□□□□ 0.54
NCLNQ969V3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 AC124016.1-201ENST00000609552 612 ntBASIC18.44■□□□□ 0.54
NCLNQ969V3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NCLNQ969V3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCLNQ969V3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NCLNQ969V3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCLNQ969V3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
NCLNQ969V3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NCLNQ969V3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCLNQ969V3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLNQ969V3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLNQ969V3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLNQ969V3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLNQ969V3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCLNQ969V3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.43■□□□□ 0.54
NCLNQ969V3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NCLNQ969V3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.43■□□□□ 0.54
NCLNQ969V3 AC066615.1-201ENST00000640911 628 ntBASIC18.43■□□□□ 0.54
NCLNQ969V3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCLNQ969V3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms