Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 AC096733.2-201ENST00000609937 1394 ntBASIC16.78■□□□□ 0.28
TMEM54Q969K7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEM54Q969K7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM54Q969K7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM54Q969K7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM54Q969K7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 TSPY7P-201ENST00000431358 1114 ntBASIC16.77■□□□□ 0.28
TMEM54Q969K7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 AP003071.4-201ENST00000562276 1284 ntBASIC16.77■□□□□ 0.28
TMEM54Q969K7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM54Q969K7 AC083906.6-201ENST00000641366 219 ntBASIC16.77■□□□□ 0.28
TMEM54Q969K7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM54Q969K7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
TMEM54Q969K7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM54Q969K7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM54Q969K7 KRT8P3-201ENST00000519669 1449 ntBASIC16.77■□□□□ 0.27
TMEM54Q969K7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM54Q969K7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TMEM54Q969K7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM54Q969K7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TMEM54Q969K7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TMEM54Q969K7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.77■□□□□ 0.27
TMEM54Q969K7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 CROCCP3-202ENST00000420820 1947 ntBASIC16.76■□□□□ 0.27
TMEM54Q969K7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.76■□□□□ 0.27
TMEM54Q969K7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 SLC25A1P4-201ENST00000567977 778 ntBASIC16.76■□□□□ 0.27
TMEM54Q969K7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 MIR4785-201ENST00000585005 73 ntBASIC16.76■□□□□ 0.27
TMEM54Q969K7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TMEM54Q969K7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
TMEM54Q969K7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM54Q969K7 SNORA78-201ENST00000459373 127 ntBASIC16.75■□□□□ 0.27
TMEM54Q969K7 AC097488.1-201ENST00000507834 756 ntBASIC16.75■□□□□ 0.27
TMEM54Q969K7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.75■□□□□ 0.27
TMEM54Q969K7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms