Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 TUBB8P6-201ENST00000436895 1288 ntBASIC16.62■□□□□ 0.25
RGP1Q92546 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.62■□□□□ 0.25
RGP1Q92546 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.62■□□□□ 0.25
RGP1Q92546 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.62■□□□□ 0.25
RGP1Q92546 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RGP1Q92546 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RGP1Q92546 AC092368.3-202ENST00000574180 1591 ntBASIC16.62■□□□□ 0.25
RGP1Q92546 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.62■□□□□ 0.25
RGP1Q92546 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.62■□□□□ 0.25
RGP1Q92546 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.62■□□□□ 0.25
RGP1Q92546 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RGP1Q92546 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RGP1Q92546 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RGP1Q92546 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
RGP1Q92546 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.61■□□□□ 0.25
RGP1Q92546 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.61■□□□□ 0.25
RGP1Q92546 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.61■□□□□ 0.25
RGP1Q92546 AC026185.1-201ENST00000445748 174 ntBASIC16.61■□□□□ 0.25
RGP1Q92546 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.61■□□□□ 0.25
RGP1Q92546 MIR5787-201ENST00000611784 55 ntBASIC16.61■□□□□ 0.25
RGP1Q92546 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.61■□□□□ 0.25
RGP1Q92546 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.61■□□□□ 0.25
RGP1Q92546 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.61■□□□□ 0.25
RGP1Q92546 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RGP1Q92546 ABALON-201ENST00000629058 1903 ntBASIC16.6■□□□□ 0.25
RGP1Q92546 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.6■□□□□ 0.25
RGP1Q92546 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.6■□□□□ 0.25
RGP1Q92546 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.6■□□□□ 0.25
RGP1Q92546 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.6■□□□□ 0.25
RGP1Q92546 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 AC073592.3-201ENST00000625118 1834 ntBASIC16.6■□□□□ 0.25
RGP1Q92546 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.6■□□□□ 0.25
RGP1Q92546 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.6■□□□□ 0.25
RGP1Q92546 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.6■□□□□ 0.25
RGP1Q92546 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RGP1Q92546 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RGP1Q92546 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RGP1Q92546 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.59■□□□□ 0.25
RGP1Q92546 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.59■□□□□ 0.25
RGP1Q92546 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RGP1Q92546 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms