Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AL031598.1-201ENST00000561511 1773 ntBASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 Z98044.1-201ENST00000632503 1764 ntBASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 AC116351.2-201ENST00000606540 1585 ntBASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 SOX15-203ENST00000570788 1093 ntBASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RTN4IP1Q8WWV3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 RPS2P52-201ENST00000469610 820 ntBASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF815P-204ENST00000434898 1737 ntBASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AC093525.10-201ENST00000625130 1569 ntBASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16■□□□□ 0.15
RTN4IP1Q8WWV3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms