Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 KRT18P68-201ENST00000392293 1000 ntBASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 AC134043.2-201ENST00000624206 2238 ntBASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.28■□□□□ 0.2
SMIM4Q8WVI0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 AC007322.4-201ENST00000509611 723 ntBASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMIM4Q8WVI0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMIM4Q8WVI0 AC099398.1-201ENST00000567919 2776 ntBASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 AC010536.3-201ENST00000620306 533 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms