Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 AL049812.1-201ENST00000432563 2267 ntBASIC19.28■□□□□ 0.68
PTCD2Q8WV60 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 AC093503.3-201ENST00000624917 2352 ntBASIC19.27■□□□□ 0.68
PTCD2Q8WV60 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.27■□□□□ 0.68
PTCD2Q8WV60 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 AC006333.2-201ENST00000607957 2099 ntBASIC19.27■□□□□ 0.68
PTCD2Q8WV60 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTCD2Q8WV60 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCD2Q8WV60 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTCD2Q8WV60 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTCD2Q8WV60 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTCD2Q8WV60 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.27■□□□□ 0.67
PTCD2Q8WV60 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 KRT17P2-201ENST00000300992 1314 ntBASIC19.26■□□□□ 0.67
PTCD2Q8WV60 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 CROCCP3-202ENST00000420820 1947 ntBASIC19.26■□□□□ 0.67
PTCD2Q8WV60 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 REXO1L10P-201ENST00000615707 1290 ntBASIC19.26■□□□□ 0.67
PTCD2Q8WV60 REXO1L12P-201ENST00000622156 912 ntBASIC19.26■□□□□ 0.67
PTCD2Q8WV60 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
PTCD2Q8WV60 AC004408.2-201ENST00000623613 2777 ntBASIC19.26■□□□□ 0.67
PTCD2Q8WV60 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 AL355355.2-201ENST00000442321 338 ntBASIC19.25■□□□□ 0.67
PTCD2Q8WV60 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 KSR1P1-201ENST00000446298 240 ntBASIC19.25■□□□□ 0.67
PTCD2Q8WV60 NUDT16P1-203ENST00000513809 620 ntBASIC19.25■□□□□ 0.67
PTCD2Q8WV60 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.25■□□□□ 0.67
PTCD2Q8WV60 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms