Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 ESPNP-201ENST00000270691 2015 ntBASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNIH3Q8TBE1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNIH3Q8TBE1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
CNIH3Q8TBE1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.39■□□□□ 0.38
CNIH3Q8TBE1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNIH3Q8TBE1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNIH3Q8TBE1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 AC013268.1-206ENST00000638368 961 ntBASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 AC112229.1-201ENST00000639295 961 ntBASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNIH3Q8TBE1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 AC073592.3-201ENST00000625118 1834 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 C2orf69P4-201ENST00000565394 541 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 CYP2T3P-201ENST00000601990 817 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 AC083906.6-201ENST00000641366 219 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 AC099398.1-201ENST00000567919 2776 ntBASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNIH3Q8TBE1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 AL355472.2-201ENST00000422958 438 ntBASIC17.37■□□□□ 0.37
CNIH3Q8TBE1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms