Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 AL445228.2-201ENST00000605589 952 ntBASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CNEP1R1Q8N9A8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 BCL2-203ENST00000589955 5011 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 BX664615.1-201ENST00000443558 458 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 AC104076.2-201ENST00000448912 469 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 DUX4L26-201ENST00000489078 1255 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 KRT18P35-201ENST00000510488 1269 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 AP003041.3-201ENST00000527151 707 ntBASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNEP1R1Q8N9A8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CNEP1R1Q8N9A8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.89■□□□□ 0.3
CNEP1R1Q8N9A8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CNEP1R1Q8N9A8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AC120498.9-201ENST00000339021 3867 ntBASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 Z82202.1-201ENST00000623446 1880 ntBASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AK4P3-201ENST00000418260 669 ntBASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 TSPY21P-201ENST00000433481 731 ntBASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AL512604.3-201ENST00000569583 964 ntBASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CNEP1R1Q8N9A8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 TREX1-205ENST00000625293 1783 ntBASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CNEP1R1Q8N9A8 TSPY23P-201ENST00000440136 739 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms