Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 AP000974.1-201ENST00000623909 2387 ntBASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SDHAP1-207ENST00000440850 2000 ntBASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 CKBP1-201ENST00000565489 1086 ntBASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 KRT8P11-201ENST00000409686 1436 ntBASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 TSPY14P-201ENST00000303979 915 ntBASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 EGLN1P1-201ENST00000531623 762 ntBASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH20Q8N6Y1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 TSPY21P-201ENST00000433481 731 ntBASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 KRT18P22-201ENST00000402024 1347 ntBASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH20Q8N6Y1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH20Q8N6Y1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms