Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPSF7Q8N684 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPSF7Q8N684 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 UNC93B4-201ENST00000505679 747 ntBASIC18.6■□□□□ 0.57
CPSF7Q8N684 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 SDHAP1-207ENST00000440850 2000 ntBASIC18.6■□□□□ 0.57
CPSF7Q8N684 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPSF7Q8N684 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPSF7Q8N684 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 AC020763.4-201ENST00000623414 4170 ntBASIC18.59■□□□□ 0.57
CPSF7Q8N684 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.59■□□□□ 0.57
CPSF7Q8N684 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.59■□□□□ 0.57
CPSF7Q8N684 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 SOX15-203ENST00000570788 1093 ntBASIC18.59■□□□□ 0.57
CPSF7Q8N684 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPSF7Q8N684 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.59■□□□□ 0.57
CPSF7Q8N684 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.58■□□□□ 0.57
CPSF7Q8N684 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.58■□□□□ 0.57
CPSF7Q8N684 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.58■□□□□ 0.57
CPSF7Q8N684 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CPSF7Q8N684 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPSF7Q8N684 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPSF7Q8N684 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.58■□□□□ 0.56
CPSF7Q8N684 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 AL133373.2-201ENST00000623187 2828 ntBASIC18.58■□□□□ 0.56
CPSF7Q8N684 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CPSF7Q8N684 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPSF7Q8N684 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPSF7Q8N684 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.57■□□□□ 0.56
CPSF7Q8N684 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPSF7Q8N684 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.57■□□□□ 0.56
CPSF7Q8N684 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPSF7Q8N684 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.57■□□□□ 0.56
CPSF7Q8N684 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms