Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AC018445.3-201ENST00000624177 1945 ntBASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AC011506.1-201ENST00000474329 610 ntBASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 AL445675.2-201ENST00000620291 557 ntBASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 ZNF815P-204ENST00000434898 1737 ntBASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC33Q8N5R6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.95■□□□□ 0.79
CCDC33Q8N5R6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 AP000974.1-201ENST00000623909 2387 ntBASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC33Q8N5R6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC33Q8N5R6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 CRYGFP-201ENST00000418459 633 ntBASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 AC073508.3-201ENST00000619697 1419 ntBASIC19.93■□□□□ 0.78
CCDC33Q8N5R6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC33Q8N5R6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms