Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 AL161938.1-201ENST00000569833 2180 ntBASIC20.24■□□□□ 0.83
TTC39CQ8N584 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 CCR12P-201ENST00000446203 998 ntBASIC20.24■□□□□ 0.83
TTC39CQ8N584 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 BX088651.1-201ENST00000540551 451 ntBASIC20.24■□□□□ 0.83
TTC39CQ8N584 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39CQ8N584 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TTC39CQ8N584 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.24■□□□□ 0.83
TTC39CQ8N584 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 TSPY17P-201ENST00000450329 467 ntBASIC20.23■□□□□ 0.83
TTC39CQ8N584 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TTC39CQ8N584 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.23■□□□□ 0.83
TTC39CQ8N584 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 EGLN1P1-201ENST00000531623 762 ntBASIC20.22■□□□□ 0.83
TTC39CQ8N584 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TTC39CQ8N584 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.22■□□□□ 0.83
TTC39CQ8N584 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 TSPY14P-201ENST00000303979 915 ntBASIC20.21■□□□□ 0.83
TTC39CQ8N584 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TTC39CQ8N584 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC39CQ8N584 AC116562.4-202ENST00000641738 218 ntBASIC20.21■□□□□ 0.83
TTC39CQ8N584 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms