Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NME8Q8N427 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.97■□□□□ 0.95
NME8Q8N427 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.96■□□□□ 0.95
NME8Q8N427 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.96■□□□□ 0.95
NME8Q8N427 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NME8Q8N427 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.96■□□□□ 0.95
NME8Q8N427 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.96■□□□□ 0.95
NME8Q8N427 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NME8Q8N427 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
NME8Q8N427 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NME8Q8N427 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
NME8Q8N427 SDHAP1-207ENST00000440850 2000 ntBASIC20.95■□□□□ 0.94
NME8Q8N427 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
NME8Q8N427 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.95■□□□□ 0.94
NME8Q8N427 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
NME8Q8N427 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NME8Q8N427 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NME8Q8N427 AC009947.2-201ENST00000444014 672 ntBASIC20.95■□□□□ 0.94
NME8Q8N427 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.95■□□□□ 0.94
NME8Q8N427 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NME8Q8N427 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NME8Q8N427 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.95■□□□□ 0.94
NME8Q8N427 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.95■□□□□ 0.94
NME8Q8N427 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NME8Q8N427 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NME8Q8N427 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.95■□□□□ 0.94
NME8Q8N427 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.94■□□□□ 0.94
NME8Q8N427 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.94■□□□□ 0.94
NME8Q8N427 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.94■□□□□ 0.94
NME8Q8N427 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.94■□□□□ 0.94
NME8Q8N427 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.94■□□□□ 0.94
NME8Q8N427 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NME8Q8N427 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NME8Q8N427 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.93■□□□□ 0.94
NME8Q8N427 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
NME8Q8N427 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.93■□□□□ 0.94
NME8Q8N427 FAM86EP-206ENST00000510506 987 ntBASIC20.93■□□□□ 0.94
NME8Q8N427 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 AP000550.4-202ENST00000639755 178 ntBASIC20.93■□□□□ 0.94
NME8Q8N427 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
NME8Q8N427 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.93■□□□□ 0.94
NME8Q8N427 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NME8Q8N427 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.93■□□□□ 0.94
NME8Q8N427 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NME8Q8N427 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NME8Q8N427 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NME8Q8N427 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NME8Q8N427 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NME8Q8N427 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NME8Q8N427 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms