Protein–RNA interactions for Protein: Q8N2G8

GHDC, GH3 domain-containing protein, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GHDCQ8N2G8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GHDCQ8N2G8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GHDCQ8N2G8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GHDCQ8N2G8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 TREX1-205ENST00000625293 1783 ntBASIC17.79■□□□□ 0.44
GHDCQ8N2G8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 TMPOP1-202ENST00000424642 1267 ntBASIC17.79■□□□□ 0.44
GHDCQ8N2G8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 MIR6786-201ENST00000616843 113 ntBASIC17.79■□□□□ 0.44
GHDCQ8N2G8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 AP000974.1-201ENST00000623909 2387 ntBASIC17.79■□□□□ 0.44
GHDCQ8N2G8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 AC116351.2-201ENST00000606540 1585 ntBASIC17.79■□□□□ 0.44
GHDCQ8N2G8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
GHDCQ8N2G8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 C1QL1P1-201ENST00000568105 661 ntBASIC17.78■□□□□ 0.44
GHDCQ8N2G8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC005363.2-201ENST00000618631 242 ntBASIC17.78■□□□□ 0.44
GHDCQ8N2G8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
GHDCQ8N2G8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GHDCQ8N2G8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 AC093484.2-201ENST00000580996 2166 ntBASIC17.77■□□□□ 0.44
GHDCQ8N2G8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 AC004408.2-201ENST00000623613 2777 ntBASIC17.77■□□□□ 0.44
GHDCQ8N2G8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.77■□□□□ 0.44
GHDCQ8N2G8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 YBX1P10-201ENST00000444752 975 ntBASIC17.77■□□□□ 0.44
GHDCQ8N2G8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 NAPSB-206ENST00000562112 1266 ntBASIC17.77■□□□□ 0.44
GHDCQ8N2G8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GHDCQ8N2G8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GHDCQ8N2G8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GHDCQ8N2G8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.77■□□□□ 0.43
GHDCQ8N2G8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GHDCQ8N2G8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms