Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST3Q8N1M1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 KRT8P11-201ENST00000409686 1436 ntBASIC17.65■□□□□ 0.42
BEST3Q8N1M1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ZNF815P-204ENST00000434898 1737 ntBASIC17.65■□□□□ 0.42
BEST3Q8N1M1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 TSPY17P-201ENST00000450329 467 ntBASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 AC104417.2-201ENST00000562989 1793 ntBASIC17.65■□□□□ 0.42
BEST3Q8N1M1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST3Q8N1M1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST3Q8N1M1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST3Q8N1M1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST3Q8N1M1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
BEST3Q8N1M1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST3Q8N1M1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST3Q8N1M1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 CA15P1-201ENST00000481698 905 ntBASIC17.63■□□□□ 0.41
BEST3Q8N1M1 PRSS44-201ENST00000515154 1146 ntBASIC17.63■□□□□ 0.41
BEST3Q8N1M1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 AL353719.1-201ENST00000566847 864 ntBASIC17.63■□□□□ 0.41
BEST3Q8N1M1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST3Q8N1M1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms