Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.48■□□□□ 0.71
SIX5Q8N196 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.48■□□□□ 0.71
SIX5Q8N196 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX5Q8N196 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SIX5Q8N196 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SIX5Q8N196 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SIX5Q8N196 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 FEM1AP1-201ENST00000431297 1995 ntBASIC19.47■□□□□ 0.71
SIX5Q8N196 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX5Q8N196 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SIX5Q8N196 TSPY19P-201ENST00000418461 509 ntBASIC19.47■□□□□ 0.71
SIX5Q8N196 TSPY18P-201ENST00000441642 509 ntBASIC19.47■□□□□ 0.71
SIX5Q8N196 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.47■□□□□ 0.71
SIX5Q8N196 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.47■□□□□ 0.71
SIX5Q8N196 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.47■□□□□ 0.71
SIX5Q8N196 AC024243.1-201ENST00000609234 778 ntBASIC19.47■□□□□ 0.71
SIX5Q8N196 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SIX5Q8N196 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX5Q8N196 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 KRT18P1-202ENST00000452408 1331 ntBASIC19.47■□□□□ 0.71
SIX5Q8N196 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.47■□□□□ 0.71
SIX5Q8N196 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SIX5Q8N196 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.46■□□□□ 0.71
SIX5Q8N196 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX5Q8N196 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX5Q8N196 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.46■□□□□ 0.71
SIX5Q8N196 CHCHD2P8-201ENST00000429873 447 ntBASIC19.46■□□□□ 0.71
SIX5Q8N196 AC079781.3-201ENST00000449110 356 ntBASIC19.46■□□□□ 0.71
SIX5Q8N196 AC079776.4-201ENST00000511039 504 ntBASIC19.46■□□□□ 0.71
SIX5Q8N196 AC091304.2-201ENST00000564639 760 ntBASIC19.46■□□□□ 0.71
SIX5Q8N196 LINC01711-201ENST00000598340 967 ntBASIC19.46■□□□□ 0.71
SIX5Q8N196 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX5Q8N196 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX5Q8N196 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SIX5Q8N196 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SIX5Q8N196 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.7
SIX5Q8N196 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX5Q8N196 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX5Q8N196 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX5Q8N196 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX5Q8N196 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX5Q8N196 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SIX5Q8N196 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX5Q8N196 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SIX5Q8N196 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX5Q8N196 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 AL121772.3-201ENST00000610840 674 ntBASIC19.45■□□□□ 0.7
SIX5Q8N196 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX5Q8N196 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.45■□□□□ 0.7
SIX5Q8N196 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SIX5Q8N196 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 AC073130.3-201ENST00000624389 2278 ntBASIC19.45■□□□□ 0.7
SIX5Q8N196 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SIX5Q8N196 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX5Q8N196 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 AL162741.1-201ENST00000565563 1558 ntBASIC19.44■□□□□ 0.7
SIX5Q8N196 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
SIX5Q8N196 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 AP000867.3-201ENST00000524675 377 ntBASIC19.44■□□□□ 0.7
SIX5Q8N196 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms