Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 AC116562.4-202ENST00000641738 218 ntBASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.58■□□□□ 0.4
C9orf40Q8IXQ3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 KRT18P22-201ENST00000402024 1347 ntBASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 AC007663.1-201ENST00000438948 1240 ntBASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 ECEL1P2-202ENST00000465689 757 ntBASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 FAM87A-204ENST00000613235 858 ntBASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C9orf40Q8IXQ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AL049812.1-201ENST00000432563 2267 ntBASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 TSPY17P-201ENST00000450329 467 ntBASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AC128688.1-201ENST00000487626 519 ntBASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 AL353719.1-201ENST00000566847 864 ntBASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.56■□□□□ 0.4
C9orf40Q8IXQ3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 AP003041.3-201ENST00000527151 707 ntBASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 KRT8P3-201ENST00000519669 1449 ntBASIC17.55■□□□□ 0.4
C9orf40Q8IXQ3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms