Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 RPPH1-201ENST00000516869 333 ntBASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD1LQ86WJ1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 KRT8P11-201ENST00000409686 1436 ntBASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 AC131212.4-201ENST00000623606 975 ntBASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHD1LQ86WJ1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CHD1LQ86WJ1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD1LQ86WJ1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 AP002982.1-201ENST00000492365 877 ntBASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD1LQ86WJ1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHD1LQ86WJ1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms