Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM4Q86VH4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRTM4Q86VH4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 AC113347.1-201ENST00000413321 391 ntBASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 FAM87A-204ENST00000613235 858 ntBASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRTM4Q86VH4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 IRX1P1-201ENST00000438849 1838 ntBASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 HMGA1P5-201ENST00000412453 271 ntBASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRTM4Q86VH4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 AP003041.3-201ENST00000527151 707 ntBASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRTM4Q86VH4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms