Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALYREFQ86V81 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.91■□□□□ 0.78
ALYREFQ86V81 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 AL136038.3-201ENST00000561909 1096 ntBASIC19.91■□□□□ 0.78
ALYREFQ86V81 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ALYREFQ86V81 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALYREFQ86V81 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 AL031008.1-201ENST00000619963 541 ntBASIC19.9■□□□□ 0.78
ALYREFQ86V81 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 FSCN1P1-201ENST00000568912 1481 ntBASIC19.9■□□□□ 0.78
ALYREFQ86V81 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
ALYREFQ86V81 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALYREFQ86V81 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ALYREFQ86V81 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.89■□□□□ 0.78
ALYREFQ86V81 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALYREFQ86V81 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.89■□□□□ 0.77
ALYREFQ86V81 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 AC092865.5-201ENST00000545435 363 ntBASIC19.88■□□□□ 0.77
ALYREFQ86V81 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 AC141257.4-201ENST00000634557 245 ntBASIC19.88■□□□□ 0.77
ALYREFQ86V81 AC136944.6-201ENST00000634818 245 ntBASIC19.88■□□□□ 0.77
ALYREFQ86V81 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALYREFQ86V81 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ALYREFQ86V81 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALYREFQ86V81 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALYREFQ86V81 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms