Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP48Q86UV5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.33■■□□□ 1.32
USP48Q86UV5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP48Q86UV5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.33■■□□□ 1.32
USP48Q86UV5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.33■■□□□ 1.32
USP48Q86UV5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.33■■□□□ 1.32
USP48Q86UV5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.32■■□□□ 1.32
USP48Q86UV5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 KRT18P38-201ENST00000449496 1282 ntBASIC23.32■■□□□ 1.32
USP48Q86UV5 TSPY17P-201ENST00000450329 467 ntBASIC23.32■■□□□ 1.32
USP48Q86UV5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.32■■□□□ 1.32
USP48Q86UV5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
USP48Q86UV5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 AC069148.1-201ENST00000608741 768 ntBASIC23.32■■□□□ 1.32
USP48Q86UV5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.32■■□□□ 1.32
USP48Q86UV5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.32■■□□□ 1.32
USP48Q86UV5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.32■■□□□ 1.32
USP48Q86UV5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.32■■□□□ 1.32
USP48Q86UV5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
USP48Q86UV5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP48Q86UV5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.31■■□□□ 1.32
USP48Q86UV5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.31■■□□□ 1.32
USP48Q86UV5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
USP48Q86UV5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 PRSS44-201ENST00000515154 1146 ntBASIC23.31■■□□□ 1.32
USP48Q86UV5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP48Q86UV5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
USP48Q86UV5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
USP48Q86UV5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.3■■□□□ 1.32
USP48Q86UV5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
USP48Q86UV5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.3■■□□□ 1.32
USP48Q86UV5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.3■■□□□ 1.32
USP48Q86UV5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.3■■□□□ 1.32
USP48Q86UV5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.3■■□□□ 1.32
USP48Q86UV5 AL353719.1-201ENST00000566847 864 ntBASIC23.3■■□□□ 1.32
USP48Q86UV5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.3■■□□□ 1.32
USP48Q86UV5 AL691432.3-201ENST00000621860 400 ntBASIC23.3■■□□□ 1.32
USP48Q86UV5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
USP48Q86UV5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.3■■□□□ 1.32
USP48Q86UV5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.3■■□□□ 1.32
USP48Q86UV5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.3■■□□□ 1.32
USP48Q86UV5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
USP48Q86UV5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP48Q86UV5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 BX323043.1-201ENST00000641006 1765 ntBASIC23.29■■□□□ 1.32
USP48Q86UV5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
USP48Q86UV5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.29■■□□□ 1.32
USP48Q86UV5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
USP48Q86UV5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.29■■□□□ 1.32
USP48Q86UV5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
USP48Q86UV5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
USP48Q86UV5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
USP48Q86UV5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
USP48Q86UV5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP48Q86UV5 DPP3P2-201ENST00000416030 1696 ntBASIC23.28■■□□□ 1.32
USP48Q86UV5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP48Q86UV5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms