Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 GCSHP2-201ENST00000560971 527 ntBASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 TSPY21P-201ENST00000433481 731 ntBASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 MIR4674-201ENST00000582457 87 ntBASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RAI1Q7Z5J4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 ZNF815P-204ENST00000434898 1737 ntBASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAI1Q7Z5J4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 AC012313.10-201ENST00000623509 926 ntBASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 TREX1-205ENST00000625293 1783 ntBASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 AL645929.1-201ENST00000420084 975 ntBASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.23■□□□□ 0.19
RAI1Q7Z5J4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 LINC01311-201ENST00000565162 1445 ntBASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RAI1Q7Z5J4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms