Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AL023284.2-201ENST00000405850 579 ntBASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 PKD1P6-201ENST00000343738 4769 ntBASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.77■□□□□ 0.76
BHLHA9Q7RTU4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BHLHA9Q7RTU4 AL512353.2-201ENST00000448759 1962 ntBASIC19.77■□□□□ 0.75
BHLHA9Q7RTU4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
BHLHA9Q7RTU4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
BHLHA9Q7RTU4 KRT8P45-201ENST00000414328 1447 ntBASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 RN7SL850P-201ENST00000579959 291 ntBASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BHLHA9Q7RTU4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 KRT18P57-201ENST00000443599 1254 ntBASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 FAM210CP-201ENST00000445714 574 ntBASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BHLHA9Q7RTU4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 KRT8P32-201ENST00000512863 1461 ntBASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 KRT18P21-201ENST00000515767 1272 ntBASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 AC092865.7-201ENST00000641832 219 ntBASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.74■□□□□ 0.75
BHLHA9Q7RTU4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 AL137013.1-201ENST00000432946 1228 ntBASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
BHLHA9Q7RTU4 CR769767.2-201ENST00000622735 460 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms