Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.87■□□□□ 0.13
VPS13CQ709C8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 BX640515.1-201ENST00000617215 977 ntBASIC15.87■□□□□ 0.13
VPS13CQ709C8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 LINC01006-201ENST00000333319 2292 ntBASIC15.87■□□□□ 0.13
VPS13CQ709C8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS13CQ709C8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS13CQ709C8 Z83836.1-201ENST00000624605 1642 ntBASIC15.87■□□□□ 0.13
VPS13CQ709C8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 PMS2P1-201ENST00000431037 1228 ntBASIC15.86■□□□□ 0.13
VPS13CQ709C8 NUS1P1-201ENST00000446295 882 ntBASIC15.86■□□□□ 0.13
VPS13CQ709C8 SAPCD2P3-201ENST00000455031 850 ntBASIC15.86■□□□□ 0.13
VPS13CQ709C8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 REXO1L6P-202ENST00000619970 1078 ntBASIC15.86■□□□□ 0.13
VPS13CQ709C8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS13CQ709C8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS13CQ709C8 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.86■□□□□ 0.13
VPS13CQ709C8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 AC004870.1-201ENST00000315132 882 ntBASIC15.85■□□□□ 0.13
VPS13CQ709C8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 AL121912.1-201ENST00000603683 238 ntBASIC15.85■□□□□ 0.13
VPS13CQ709C8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 AC024243.1-201ENST00000609234 778 ntBASIC15.85■□□□□ 0.13
VPS13CQ709C8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS13CQ709C8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS13CQ709C8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13CQ709C8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13CQ709C8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VPS13CQ709C8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.84■□□□□ 0.13
VPS13CQ709C8 AC079602.3-201ENST00000623931 403 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms