Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AL591742.1-201ENST00000604433 565 ntBASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AC092118.2-201ENST00000613495 667 ntBASIC16.55■□□□□ 0.24
C11orf88Q6PI97 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf88Q6PI97 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 FAM201B-201ENST00000458407 597 ntBASIC16.54■□□□□ 0.24
C11orf88Q6PI97 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
C11orf88Q6PI97 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 AC009237.14-201ENST00000609975 1594 ntBASIC16.53■□□□□ 0.24
C11orf88Q6PI97 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms