Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 WWOX-216ENST00000569818 525 ntBASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 AC093484.2-201ENST00000580996 2166 ntBASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.21■□□□□ 0.99
SWSAP1Q6NVH7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 ARMC10P1-201ENST00000313754 855 ntBASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SWSAP1Q6NVH7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 YBX1P2-201ENST00000489612 999 ntBASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SWSAP1Q6NVH7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 NTF6B-201ENST00000591913 560 ntBASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 AC011558.1-201ENST00000623459 338 ntBASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
SWSAP1Q6NVH7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 AL032819.2-201ENST00000624543 2162 ntBASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 RNF152P1-201ENST00000397754 604 ntBASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SWSAP1Q6NVH7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms