Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
RC3H1Q5TC82 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24■■□□□ 1.43
RC3H1Q5TC82 FOSL1P1-201ENST00000511041 816 ntBASIC24■■□□□ 1.43
RC3H1Q5TC82 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24■■□□□ 1.43
RC3H1Q5TC82 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 AC004263.2-201ENST00000617183 678 ntBASIC24■■□□□ 1.43
RC3H1Q5TC82 AC023511.2-201ENST00000618803 211 ntBASIC24■■□□□ 1.43
RC3H1Q5TC82 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24■■□□□ 1.43
RC3H1Q5TC82 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
RC3H1Q5TC82 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RC3H1Q5TC82 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RC3H1Q5TC82 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 LINC01711-201ENST00000598340 967 ntBASIC23.99■■□□□ 1.43
RC3H1Q5TC82 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.99■■□□□ 1.43
RC3H1Q5TC82 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 AL022342.1-201ENST00000400363 863 ntBASIC23.98■■□□□ 1.43
RC3H1Q5TC82 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 AC104390.1-201ENST00000555663 520 ntBASIC23.98■■□□□ 1.43
RC3H1Q5TC82 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 GPALPP1-207ENST00000611650 899 ntBASIC23.98■■□□□ 1.43
RC3H1Q5TC82 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RC3H1Q5TC82 AL391422.3-201ENST00000603791 2761 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 AP002469.2-201ENST00000531724 424 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 AC090616.6-201ENST00000582640 721 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 SLC25A6P4-201ENST00000586535 553 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 AL109659.2-201ENST00000606809 1674 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 AC006538.3-201ENST00000612495 578 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RC3H1Q5TC82 GABARAPL3-202ENST00000624044 1851 ntBASIC23.97■■□□□ 1.43
RC3H1Q5TC82 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 Z83836.1-201ENST00000624605 1642 ntBASIC23.96■■□□□ 1.43
RC3H1Q5TC82 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 HOXB1-202ENST00000577092 1414 ntBASIC23.96■■□□□ 1.43
RC3H1Q5TC82 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RC3H1Q5TC82 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
RC3H1Q5TC82 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
RC3H1Q5TC82 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms