Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB6CQ53S08 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6CQ53S08 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 AL390955.1-201ENST00000428694 934 ntBASIC19.81■□□□□ 0.76
RAB6CQ53S08 RBM17P1-201ENST00000453646 1190 ntBASIC19.81■□□□□ 0.76
RAB6CQ53S08 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 CKBP1-201ENST00000565489 1086 ntBASIC19.81■□□□□ 0.76
RAB6CQ53S08 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 MIR4497-201ENST00000583208 89 ntBASIC19.81■□□□□ 0.76
RAB6CQ53S08 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
RAB6CQ53S08 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6CQ53S08 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB6CQ53S08 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6CQ53S08 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 SLC25A1P4-201ENST00000567977 778 ntBASIC19.79■□□□□ 0.76
RAB6CQ53S08 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 AP000525.1-201ENST00000608286 694 ntBASIC19.79■□□□□ 0.76
RAB6CQ53S08 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RAB6CQ53S08 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6CQ53S08 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RAB6CQ53S08 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6CQ53S08 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB6CQ53S08 KRT8P9-201ENST00000558927 1449 ntBASIC19.77■□□□□ 0.76
RAB6CQ53S08 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB6CQ53S08 AC097488.1-201ENST00000507834 756 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms