Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 AC004980.1-204ENST00000429707 299 ntBASIC19.24■□□□□ 0.67
CDH17Q12864 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 ITM2C-210ENST00000620962 501 ntBASIC19.24■□□□□ 0.67
CDH17Q12864 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH17Q12864 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CDH17Q12864 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 AC093525.10-201ENST00000625130 1569 ntBASIC19.23■□□□□ 0.67
CDH17Q12864 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDH17Q12864 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH17Q12864 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH17Q12864 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH17Q12864 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH17Q12864 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH17Q12864 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CDH17Q12864 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH17Q12864 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CDH17Q12864 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 KRT18P29-201ENST00000397031 1267 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 TSPY20P-201ENST00000450910 630 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 RPS2P4-201ENST00000476944 856 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CDH17Q12864 RARRES2P10-201ENST00000564312 460 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH17Q12864 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH17Q12864 AL359736.2-201ENST00000621992 437 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 FAM197Y4-202ENST00000622692 608 ntBASIC19.22■□□□□ 0.67
CDH17Q12864 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH17Q12864 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CDH17Q12864 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH17Q12864 AL031598.1-201ENST00000561511 1773 ntBASIC19.21■□□□□ 0.67
CDH17Q12864 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
CDH17Q12864 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDH17Q12864 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CDH17Q12864 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.21■□□□□ 0.67
CDH17Q12864 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CDH17Q12864 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH17Q12864 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH17Q12864 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDH17Q12864 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH17Q12864 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH17Q12864 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH17Q12864 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH17Q12864 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CDH17Q12864 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH17Q12864 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms