Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PCDH1Q08174 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PCDH1Q08174 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH1Q08174 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH1Q08174 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH1Q08174 AC093503.3-201ENST00000624917 2352 ntBASIC18.37■□□□□ 0.53
PCDH1Q08174 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH1Q08174 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH1Q08174 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDH1Q08174 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH1Q08174 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH1Q08174 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDH1Q08174 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PCDH1Q08174 KRT8P11-201ENST00000409686 1436 ntBASIC18.36■□□□□ 0.53
PCDH1Q08174 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH1Q08174 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH1Q08174 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH1Q08174 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH1Q08174 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH1Q08174 AC130371.2-201ENST00000619443 611 ntBASIC18.36■□□□□ 0.53
PCDH1Q08174 AL031985.4-201ENST00000642138 673 ntBASIC18.36■□□□□ 0.53
PCDH1Q08174 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH1Q08174 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDH1Q08174 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDH1Q08174 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDH1Q08174 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 AL031598.1-201ENST00000561511 1773 ntBASIC18.35■□□□□ 0.53
PCDH1Q08174 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 RCC2P6-201ENST00000526625 1557 ntBASIC18.35■□□□□ 0.53
PCDH1Q08174 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 AC091390.4-202ENST00000476426 537 ntBASIC18.35■□□□□ 0.53
PCDH1Q08174 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH1Q08174 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH1Q08174 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH1Q08174 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH1Q08174 AC083906.6-201ENST00000641366 219 ntBASIC18.35■□□□□ 0.53
PCDH1Q08174 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH1Q08174 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH1Q08174 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH1Q08174 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDH1Q08174 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 AC004951.3-201ENST00000418645 1148 ntBASIC18.34■□□□□ 0.53
PCDH1Q08174 GCSHP5-201ENST00000443090 522 ntBASIC18.34■□□□□ 0.53
PCDH1Q08174 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH1Q08174 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH1Q08174 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDH1Q08174 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDH1Q08174 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH1Q08174 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDH1Q08174 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms