Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 AL138781.2-201ENST00000617896 1843 ntBASIC14.57□□□□□ -0.08
HIST1H1AQ02539 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIST1H1AQ02539 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 AC092666.2-201ENST00000613287 246 ntBASIC14.56□□□□□ -0.08
HIST1H1AQ02539 AL121906.2-201ENST00000621597 723 ntBASIC14.56□□□□□ -0.08
HIST1H1AQ02539 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.56□□□□□ -0.08
HIST1H1AQ02539 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.55□□□□□ -0.08
HIST1H1AQ02539 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 PNMA6B-201ENST00000538162 1200 ntBASIC14.55□□□□□ -0.08
HIST1H1AQ02539 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AL109923.1-201ENST00000618799 583 ntBASIC14.55□□□□□ -0.08
HIST1H1AQ02539 HLA-B-256ENST00000639848 1089 ntBASIC14.55□□□□□ -0.08
HIST1H1AQ02539 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H1AQ02539 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.54□□□□□ -0.08
HIST1H1AQ02539 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AL138781.1-201ENST00000566567 1274 ntBASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AC060766.5-201ENST00000590539 871 ntBASIC14.54□□□□□ -0.08
HIST1H1AQ02539 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 AP006587.1-201ENST00000534129 1502 ntBASIC14.54□□□□□ -0.08
HIST1H1AQ02539 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H1AQ02539 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms