Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.96■□□□□ 0.79
CBX1P83916 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CBX1P83916 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.95■□□□□ 0.78
CBX1P83916 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.95■□□□□ 0.78
CBX1P83916 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 MIR4508-201ENST00000584178 70 ntBASIC19.95■□□□□ 0.78
CBX1P83916 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.95■□□□□ 0.78
CBX1P83916 AC137630.3-201ENST00000607245 391 ntBASIC19.95■□□□□ 0.78
CBX1P83916 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.95■□□□□ 0.78
CBX1P83916 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CBX1P83916 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CBX1P83916 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 AC004987.1-201ENST00000428627 508 ntBASIC19.94■□□□□ 0.78
CBX1P83916 HSD17B1P1-201ENST00000590052 955 ntBASIC19.94■□□□□ 0.78
CBX1P83916 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CBX1P83916 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.94■□□□□ 0.78
CBX1P83916 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.94■□□□□ 0.78
CBX1P83916 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.94■□□□□ 0.78
CBX1P83916 PCDHB19P-201ENST00000570871 2371 ntBASIC19.94■□□□□ 0.78
CBX1P83916 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CBX1P83916 ANO7L1-203ENST00000602586 1720 ntBASIC19.93■□□□□ 0.78
CBX1P83916 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.93■□□□□ 0.78
CBX1P83916 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CBX1P83916 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 ATP5G2P3-201ENST00000429083 425 ntBASIC19.93■□□□□ 0.78
CBX1P83916 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 NTF6A-201ENST00000591175 560 ntBASIC19.93■□□□□ 0.78
CBX1P83916 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX1P83916 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CBX1P83916 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 FER1L4-210ENST00000615531 5998 ntBASIC19.92■□□□□ 0.78
CBX1P83916 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX1P83916 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.92■□□□□ 0.78
CBX1P83916 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX1P83916 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CBX1P83916 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX1P83916 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX1P83916 pRNA.6-201ENST00000610482 90 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms