Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SMIM11AP58511 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.56■□□□□ 0.4
SMIM11AP58511 AC091874.3-201ENST00000512672 1195 ntBASIC17.56■□□□□ 0.4
SMIM11AP58511 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMIM11AP58511 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.56■□□□□ 0.4
SMIM11AP58511 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.56■□□□□ 0.4
SMIM11AP58511 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.56■□□□□ 0.4
SMIM11AP58511 AL121829.2-201ENST00000620908 328 ntBASIC17.56■□□□□ 0.4
SMIM11AP58511 HLA-B-256ENST00000639848 1089 ntBASIC17.56■□□□□ 0.4
SMIM11AP58511 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SMIM11AP58511 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SMIM11AP58511 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SMIM11AP58511 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
SMIM11AP58511 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMIM11AP58511 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
SMIM11AP58511 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMIM11AP58511 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.55■□□□□ 0.4
SMIM11AP58511 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 AC092368.3-202ENST00000574180 1591 ntBASIC17.55■□□□□ 0.4
SMIM11AP58511 MIR663A-201ENST00000385250 93 ntBASIC17.55■□□□□ 0.4
SMIM11AP58511 CDCA4P2-201ENST00000441182 718 ntBASIC17.55■□□□□ 0.4
SMIM11AP58511 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
SMIM11AP58511 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.55■□□□□ 0.4
SMIM11AP58511 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.55■□□□□ 0.4
SMIM11AP58511 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.55■□□□□ 0.4
SMIM11AP58511 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMIM11AP58511 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.55■□□□□ 0.4
SMIM11AP58511 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.55■□□□□ 0.4
SMIM11AP58511 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.55■□□□□ 0.4
SMIM11AP58511 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMIM11AP58511 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
SMIM11AP58511 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMIM11AP58511 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.54■□□□□ 0.4
SMIM11AP58511 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 TSPY21P-201ENST00000433481 731 ntBASIC17.54■□□□□ 0.4
SMIM11AP58511 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.54■□□□□ 0.4
SMIM11AP58511 AL121832.2-201ENST00000610979 668 ntBASIC17.54■□□□□ 0.4
SMIM11AP58511 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.54■□□□□ 0.4
SMIM11AP58511 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
SMIM11AP58511 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMIM11AP58511 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.53■□□□□ 0.4
SMIM11AP58511 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.53■□□□□ 0.4
SMIM11AP58511 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SMIM11AP58511 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 AC120498.8-201ENST00000614275 531 ntBASIC17.53■□□□□ 0.4
SMIM11AP58511 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMIM11AP58511 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SMIM11AP58511 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.53■□□□□ 0.4
SMIM11AP58511 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.53■□□□□ 0.4
SMIM11AP58511 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms