Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 AC004980.1-204ENST00000429707 299 ntBASIC17.45■□□□□ 0.38
CLDN20P56880 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.45■□□□□ 0.38
CLDN20P56880 TSPY15P-201ENST00000457163 923 ntBASIC17.45■□□□□ 0.38
CLDN20P56880 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 NUDT16P1-203ENST00000513809 620 ntBASIC17.45■□□□□ 0.38
CLDN20P56880 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.45■□□□□ 0.38
CLDN20P56880 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.45■□□□□ 0.38
CLDN20P56880 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
CLDN20P56880 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN20P56880 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLDN20P56880 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN20P56880 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
CLDN20P56880 Z82202.1-201ENST00000623446 1880 ntBASIC17.44■□□□□ 0.38
CLDN20P56880 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN20P56880 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.44■□□□□ 0.38
CLDN20P56880 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.44■□□□□ 0.38
CLDN20P56880 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 AL355075.4-201ENST00000554988 638 ntBASIC17.44■□□□□ 0.38
CLDN20P56880 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 AL031985.4-201ENST00000642138 673 ntBASIC17.44■□□□□ 0.38
CLDN20P56880 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN20P56880 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN20P56880 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN20P56880 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLDN20P56880 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN20P56880 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN20P56880 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN20P56880 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN20P56880 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN20P56880 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 AC131212.4-201ENST00000623606 975 ntBASIC17.43■□□□□ 0.38
CLDN20P56880 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLDN20P56880 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN20P56880 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 AC020916.1-201ENST00000587762 1774 ntBASIC17.43■□□□□ 0.38
CLDN20P56880 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN20P56880 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN20P56880 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CLDN20P56880 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLDN20P56880 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms