Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN8P56748 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CLDN8P56748 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN8P56748 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN8P56748 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN8P56748 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 AC135050.7-201ENST00000624508 2218 ntBASIC18.11■□□□□ 0.49
CLDN8P56748 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN8P56748 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 AC090192.1-201ENST00000517740 490 ntBASIC18.11■□□□□ 0.49
CLDN8P56748 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN8P56748 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 MTDHP1-201ENST00000605323 784 ntBASIC18.11■□□□□ 0.49
CLDN8P56748 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CLDN8P56748 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN8P56748 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN8P56748 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN8P56748 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN8P56748 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN8P56748 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLDN8P56748 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.1■□□□□ 0.49
CLDN8P56748 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN8P56748 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLDN8P56748 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN8P56748 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN8P56748 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN8P56748 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CLDN8P56748 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN8P56748 KRT8P41-201ENST00000533985 1514 ntBASIC18.09■□□□□ 0.49
CLDN8P56748 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLDN8P56748 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN8P56748 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 AL355802.2-201ENST00000402069 882 ntBASIC18.09■□□□□ 0.49
CLDN8P56748 KRT17P3-201ENST00000420566 1262 ntBASIC18.09■□□□□ 0.49
CLDN8P56748 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.09■□□□□ 0.49
CLDN8P56748 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN8P56748 AP003097.1-201ENST00000530657 1135 ntBASIC18.09■□□□□ 0.49
CLDN8P56748 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN8P56748 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN8P56748 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLDN8P56748 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN8P56748 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms