Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC008622.2-201ENST00000617006 1229 ntBASIC16.7■□□□□ 0.26
FOXG1P55316 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXG1P55316 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.7■□□□□ 0.26
FOXG1P55316 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXG1P55316 AL161938.1-201ENST00000569833 2180 ntBASIC16.7■□□□□ 0.26
FOXG1P55316 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
FOXG1P55316 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXG1P55316 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXG1P55316 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXG1P55316 AC007663.1-201ENST00000438948 1240 ntBASIC16.69■□□□□ 0.26
FOXG1P55316 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 FAM87A-204ENST00000613235 858 ntBASIC16.69■□□□□ 0.26
FOXG1P55316 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 FEM1AP3-201ENST00000403722 1741 ntBASIC16.69■□□□□ 0.26
FOXG1P55316 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXG1P55316 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXG1P55316 AC092338.2-201ENST00000568827 1415 ntBASIC16.69■□□□□ 0.26
FOXG1P55316 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 KRT18P22-201ENST00000402024 1347 ntBASIC16.69■□□□□ 0.26
FOXG1P55316 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXG1P55316 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXG1P55316 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FOXG1P55316 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
FOXG1P55316 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 FP475955.4-201ENST00000623131 1990 ntBASIC16.68■□□□□ 0.26
FOXG1P55316 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
FOXG1P55316 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.68■□□□□ 0.26
FOXG1P55316 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FOXG1P55316 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FOXG1P55316 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXG1P55316 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.68■□□□□ 0.26
FOXG1P55316 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXG1P55316 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXG1P55316 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
FOXG1P55316 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXG1P55316 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
FOXG1P55316 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 SLC25A1P2-201ENST00000430693 912 ntBASIC16.67■□□□□ 0.26
FOXG1P55316 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 AP003041.3-201ENST00000527151 707 ntBASIC16.67■□□□□ 0.26
FOXG1P55316 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FOXG1P55316 AL353719.1-201ENST00000566847 864 ntBASIC16.67■□□□□ 0.26
FOXG1P55316 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 AC116562.4-202ENST00000641738 218 ntBASIC16.67■□□□□ 0.26
FOXG1P55316 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXG1P55316 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXG1P55316 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXG1P55316 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms