Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
NR1H2P55055 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.01■□□□□ 0.47
NR1H2P55055 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NR1H2P55055 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.01■□□□□ 0.47
NR1H2P55055 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18■□□□□ 0.47
NR1H2P55055 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18■□□□□ 0.47
NR1H2P55055 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 AC009053.2-201ENST00000563701 2365 ntBASIC18■□□□□ 0.47
NR1H2P55055 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 KRT18P29-201ENST00000397031 1267 ntBASIC18■□□□□ 0.47
NR1H2P55055 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 AC091799.1-201ENST00000422823 811 ntBASIC18■□□□□ 0.47
NR1H2P55055 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18■□□□□ 0.47
NR1H2P55055 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18■□□□□ 0.47
NR1H2P55055 DET1-205ENST00000558413 583 ntTSL 4 BASIC18■□□□□ 0.47
NR1H2P55055 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18■□□□□ 0.47
NR1H2P55055 ITM2C-210ENST00000620962 501 ntBASIC18■□□□□ 0.47
NR1H2P55055 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NR1H2P55055 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NR1H2P55055 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 DUSP5P2-201ENST00000426873 1033 ntBASIC17.99■□□□□ 0.47
NR1H2P55055 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.99■□□□□ 0.47
NR1H2P55055 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H2P55055 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.99■□□□□ 0.47
NR1H2P55055 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.99■□□□□ 0.47
NR1H2P55055 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H2P55055 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.99■□□□□ 0.47
NR1H2P55055 AC008687.6-201ENST00000596318 630 ntBASIC17.99■□□□□ 0.47
NR1H2P55055 AC083880.1-201ENST00000608266 535 ntBASIC17.99■□□□□ 0.47
NR1H2P55055 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NR1H2P55055 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NR1H2P55055 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H2P55055 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NR1H2P55055 HTR7P1-202ENST00000624664 4411 ntBASIC17.99■□□□□ 0.47
NR1H2P55055 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.99■□□□□ 0.47
NR1H2P55055 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.98■□□□□ 0.47
NR1H2P55055 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NR1H2P55055 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NR1H2P55055 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NR1H2P55055 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.98■□□□□ 0.47
NR1H2P55055 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 AC093827.2-201ENST00000512654 315 ntBASIC17.98■□□□□ 0.47
NR1H2P55055 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.98■□□□□ 0.47
NR1H2P55055 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NR1H2P55055 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NR1H2P55055 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H2P55055 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.98■□□□□ 0.47
NR1H2P55055 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H2P55055 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms