Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA2D1P54289 AL023803.3-201ENST00000615559 522 ntBASIC20.18■□□□□ 0.82
CACNA2D1P54289 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CACNA2D1P54289 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 KRT18P22-201ENST00000402024 1347 ntBASIC20.18■□□□□ 0.82
CACNA2D1P54289 AC093484.2-201ENST00000580996 2166 ntBASIC20.18■□□□□ 0.82
CACNA2D1P54289 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.18■□□□□ 0.82
CACNA2D1P54289 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CACNA2D1P54289 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 AC005521.1-201ENST00000393351 872 ntBASIC20.17■□□□□ 0.82
CACNA2D1P54289 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 SLC25A3P1-201ENST00000443844 931 ntBASIC20.17■□□□□ 0.82
CACNA2D1P54289 AC010203.1-204ENST00000548782 407 ntBASIC20.17■□□□□ 0.82
CACNA2D1P54289 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.17■□□□□ 0.82
CACNA2D1P54289 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CACNA2D1P54289 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 TEX21P-204ENST00000641479 1693 ntBASIC20.16■□□□□ 0.82
CACNA2D1P54289 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 PRSS44-201ENST00000515154 1146 ntBASIC20.16■□□□□ 0.82
CACNA2D1P54289 RN7SL850P-201ENST00000579959 291 ntBASIC20.16■□□□□ 0.82
CACNA2D1P54289 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 AC005363.2-201ENST00000618631 242 ntBASIC20.16■□□□□ 0.82
CACNA2D1P54289 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 AC092338.2-201ENST00000568827 1415 ntBASIC20.16■□□□□ 0.82
CACNA2D1P54289 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CACNA2D1P54289 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CACNA2D1P54289 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CACNA2D1P54289 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNA2D1P54289 TERF1P1-201ENST00000311003 1181 ntBASIC20.15■□□□□ 0.82
CACNA2D1P54289 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 AC113347.1-201ENST00000413321 391 ntBASIC20.15■□□□□ 0.82
CACNA2D1P54289 AC007663.1-201ENST00000438948 1240 ntBASIC20.15■□□□□ 0.82
CACNA2D1P54289 KRT18P57-201ENST00000443599 1254 ntBASIC20.15■□□□□ 0.82
CACNA2D1P54289 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CACNA2D1P54289 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.15■□□□□ 0.82
CACNA2D1P54289 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.15■□□□□ 0.82
CACNA2D1P54289 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CACNA2D1P54289 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CACNA2D1P54289 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CACNA2D1P54289 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CACNA2D1P54289 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
CACNA2D1P54289 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CACNA2D1P54289 AC073508.3-201ENST00000619697 1419 ntBASIC20.14■□□□□ 0.81
CACNA2D1P54289 SLC25A1P2-201ENST00000430693 912 ntBASIC20.14■□□□□ 0.81
CACNA2D1P54289 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.14■□□□□ 0.81
CACNA2D1P54289 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms